Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Gm14928-201ENSMUST00000120198 477 ntBASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Gm9794-201ENSMUST00000202370 423 ntBASIC17.2■□□□□ 0.34
Clrn2B2RVW2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn2B2RVW2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Gm12859-201ENSMUST00000117834 427 ntBASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Gm24694-201ENSMUST00000180054 110 ntBASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Gm27663-201ENSMUST00000184839 110 ntBASIC17.19■□□□□ 0.34
Clrn2B2RVW2 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Gm46209-201ENSMUST00000217912 553 ntBASIC17.19■□□□□ 0.34
Clrn2B2RVW2 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Clrn2B2RVW2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Gm12490-201ENSMUST00000120255 560 ntBASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Clrn2B2RVW2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn2B2RVW2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn2B2RVW2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn2B2RVW2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn2B2RVW2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Clrn2B2RVW2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn2B2RVW2 Gm14127-201ENSMUST00000117906 678 ntBASIC17.17■□□□□ 0.34
Clrn2B2RVW2 Gm4875-201ENSMUST00000118257 786 ntBASIC17.17■□□□□ 0.34
Clrn2B2RVW2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.17■□□□□ 0.34
Clrn2B2RVW2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Clrn2B2RVW2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Clrn2B2RVW2 Gm29310-201ENSMUST00000185468 696 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms