Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Slc22a28B2RT89 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc22a28B2RT89 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Slc22a28B2RT89 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.78□□□□□ -0.2
Slc22a28B2RT89 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Slc22a28B2RT89 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Slc22a28B2RT89 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Slc22a28B2RT89 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.76□□□□□ -0.21
Slc22a28B2RT89 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Slc22a28B2RT89 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Gm13418-201ENSMUST00000119097 944 ntBASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Gm6089-201ENSMUST00000197666 938 ntBASIC13.75□□□□□ -0.21
Slc22a28B2RT89 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Slc22a28B2RT89 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms