Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn7aB1AYL1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn7aB1AYL1 Gm5425-201ENSMUST00000214125 459 ntBASIC18.96■□□□□ 0.63
Scn7aB1AYL1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Scn7aB1AYL1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn7aB1AYL1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn7aB1AYL1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn7aB1AYL1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn7aB1AYL1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn7aB1AYL1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn7aB1AYL1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn7aB1AYL1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn7aB1AYL1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
Scn7aB1AYL1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Gm12882-201ENSMUST00000121696 517 ntBASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Gm5354-201ENSMUST00000182417 973 ntBASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 AC155252.1-201ENSMUST00000226462 1208 ntBASIC18.95■□□□□ 0.62
Scn7aB1AYL1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn7aB1AYL1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Scn7aB1AYL1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn7aB1AYL1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn7aB1AYL1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn7aB1AYL1 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.94■□□□□ 0.62
Scn7aB1AYL1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn7aB1AYL1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn7aB1AYL1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn7aB1AYL1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.94■□□□□ 0.62
Scn7aB1AYL1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn7aB1AYL1 Gm5303-201ENSMUST00000117943 1252 ntBASIC18.94■□□□□ 0.62
Scn7aB1AYL1 Gm27701-201ENSMUST00000184498 110 ntBASIC18.94■□□□□ 0.62
Scn7aB1AYL1 Gm43433-201ENSMUST00000196573 481 ntBASIC18.94■□□□□ 0.62
Scn7aB1AYL1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn7aB1AYL1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn7aB1AYL1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn7aB1AYL1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn7aB1AYL1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn7aB1AYL1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn7aB1AYL1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Scn7aB1AYL1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Scn7aB1AYL1 Gm15957-201ENSMUST00000118893 974 ntBASIC18.93■□□□□ 0.62
Scn7aB1AYL1 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC18.93■□□□□ 0.62
Scn7aB1AYL1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn7aB1AYL1 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC18.93■□□□□ 0.62
Scn7aB1AYL1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC18.93■□□□□ 0.62
Scn7aB1AYL1 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.93■□□□□ 0.62
Scn7aB1AYL1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn7aB1AYL1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn7aB1AYL1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Scn7aB1AYL1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn7aB1AYL1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn7aB1AYL1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn7aB1AYL1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Scn7aB1AYL1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Gm44608-201ENSMUST00000206827 855 ntBASIC18.92■□□□□ 0.62
Scn7aB1AYL1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC18.92■□□□□ 0.62
Scn7aB1AYL1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Gm11918-201ENSMUST00000121660 179 ntBASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn7aB1AYL1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms