Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Col6a5A6H584 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Col6a5A6H584 Gm11814-201ENSMUST00000119515 929 ntBASIC11.16□□□□□ -0.62
Col6a5A6H584 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.16□□□□□ -0.62
Col6a5A6H584 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Gm44608-201ENSMUST00000206827 855 ntBASIC11.16□□□□□ -0.62
Col6a5A6H584 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a5A6H584 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Col6a5A6H584 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a5A6H584 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC11.15□□□□□ -0.62
Col6a5A6H584 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Col6a5A6H584 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.15□□□□□ -0.62
Col6a5A6H584 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a5A6H584 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Col6a5A6H584 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.15□□□□□ -0.62
Col6a5A6H584 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a5A6H584 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a5A6H584 Gm29127-201ENSMUST00000188304 517 ntBASIC11.15□□□□□ -0.62
Col6a5A6H584 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.15□□□□□ -0.62
Col6a5A6H584 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.15□□□□□ -0.62
Col6a5A6H584 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Col6a5A6H584 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Col6a5A6H584 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a5A6H584 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.15□□□□□ -0.62
Col6a5A6H584 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a5A6H584 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a5A6H584 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Col6a5A6H584 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a5A6H584 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Col6a5A6H584 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a5A6H584 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a5A6H584 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.15□□□□□ -0.62
Col6a5A6H584 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a5A6H584 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Col6a5A6H584 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.15□□□□□ -0.62
Col6a5A6H584 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.15□□□□□ -0.62
Col6a5A6H584 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.15□□□□□ -0.62
Col6a5A6H584 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a5A6H584 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.15□□□□□ -0.62
Col6a5A6H584 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a5A6H584 Gm40466-201ENSMUST00000212174 422 ntBASIC11.15□□□□□ -0.62
Col6a5A6H584 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.15□□□□□ -0.62
Col6a5A6H584 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a5A6H584 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col6a5A6H584 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Col6a5A6H584 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.14□□□□□ -0.63
Col6a5A6H584 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Col6a5A6H584 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Col6a5A6H584 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC11.14□□□□□ -0.63
Col6a5A6H584 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Gm26083-201ENSMUST00000157904 193 ntBASIC11.14□□□□□ -0.63
Col6a5A6H584 Gm37986-201ENSMUST00000193285 383 ntBASIC11.14□□□□□ -0.63
Col6a5A6H584 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.14□□□□□ -0.63
Col6a5A6H584 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.14□□□□□ -0.63
Col6a5A6H584 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Col6a5A6H584 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.14□□□□□ -0.63
Col6a5A6H584 Gm6222-201ENSMUST00000120787 396 ntBASIC11.14□□□□□ -0.63
Col6a5A6H584 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Col6a5A6H584 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Gm33320-201ENSMUST00000192232 530 ntBASIC11.14□□□□□ -0.63
Col6a5A6H584 Gm38341-201ENSMUST00000195357 515 ntBASIC11.14□□□□□ -0.63
Col6a5A6H584 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.14□□□□□ -0.63
Col6a5A6H584 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.14□□□□□ -0.63
Col6a5A6H584 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Col6a5A6H584 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Col6a5A6H584 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.14□□□□□ -0.63
Col6a5A6H584 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a5A6H584 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a5A6H584 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms