Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc112A0AUP1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Gm12008-201ENSMUST00000117791 755 ntBASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Gm5682-201ENSMUST00000173402 505 ntBASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Gm37153-201ENSMUST00000193637 231 ntBASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Gm9682-201ENSMUST00000197505 556 ntBASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc112A0AUP1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc112A0AUP1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Gm25990-201ENSMUST00000102440 86 ntBASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Gm28033-201ENSMUST00000184224 96 ntBASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc112A0AUP1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ccdc112A0AUP1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms