Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav6-5A0A075B6B5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Gm27011-201ENSMUST00000182352 972 ntBASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-5A0A075B6B5 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Gm11355-201ENSMUST00000121120 306 ntBASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Gm9172-201ENSMUST00000212092 954 ntBASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-5A0A075B6B5 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-5A0A075B6B5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms