Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav18A0A075B656 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.25□□□□□ -0.45
Trav18A0A075B656 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.25□□□□□ -0.45
Trav18A0A075B656 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav18A0A075B656 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.24□□□□□ -0.45
Trav18A0A075B656 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Gm13418-201ENSMUST00000119097 944 ntBASIC12.24□□□□□ -0.45
Trav18A0A075B656 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.24□□□□□ -0.45
Trav18A0A075B656 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.24□□□□□ -0.45
Trav18A0A075B656 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Gm44357-201ENSMUST00000195897 142 ntBASIC12.24□□□□□ -0.45
Trav18A0A075B656 Gm19658-201ENSMUST00000196231 138 ntBASIC12.24□□□□□ -0.45
Trav18A0A075B656 Gm44367-201ENSMUST00000196836 138 ntBASIC12.24□□□□□ -0.45
Trav18A0A075B656 Gm44350-201ENSMUST00000197197 138 ntBASIC12.24□□□□□ -0.45
Trav18A0A075B656 Gm44390-201ENSMUST00000197533 144 ntBASIC12.24□□□□□ -0.45
Trav18A0A075B656 Gm44313-201ENSMUST00000198018 138 ntBASIC12.24□□□□□ -0.45
Trav18A0A075B656 Gm44486-201ENSMUST00000198508 138 ntBASIC12.24□□□□□ -0.45
Trav18A0A075B656 Gm44314-201ENSMUST00000199263 138 ntBASIC12.24□□□□□ -0.45
Trav18A0A075B656 Gm44394-201ENSMUST00000199558 138 ntBASIC12.24□□□□□ -0.45
Trav18A0A075B656 Gm44484-201ENSMUST00000199873 138 ntBASIC12.24□□□□□ -0.45
Trav18A0A075B656 Gm44466-201ENSMUST00000200264 138 ntBASIC12.24□□□□□ -0.45
Trav18A0A075B656 Gm44359-201ENSMUST00000200671 138 ntBASIC12.24□□□□□ -0.45
Trav18A0A075B656 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav18A0A075B656 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trav18A0A075B656 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav18A0A075B656 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.23□□□□□ -0.45
Trav18A0A075B656 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.23□□□□□ -0.45
Trav18A0A075B656 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav18A0A075B656 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav18A0A075B656 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms