Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav16nA0A075B634 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Gm13312-201ENSMUST00000119631 718 ntBASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav16nA0A075B634 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16nA0A075B634 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms