Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-1A0A075B5Z8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm6728-201ENSMUST00000178117 1065 ntBASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm10252-201ENSMUST00000209541 832 ntBASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-1A0A075B5Z8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-1A0A075B5Z8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-1A0A075B5Z8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms