Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb3S4R1G7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb3S4R1G7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
H2afb3S4R1G7 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb3S4R1G7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb3S4R1G7 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb3S4R1G7 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb3S4R1G7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb3S4R1G7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
H2afb3S4R1G7 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.46□□□□□ -0.26
H2afb3S4R1G7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Gm4535-201ENSMUST00000182274 558 ntBASIC13.45□□□□□ -0.26
H2afb3S4R1G7 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Gm10355-201ENSMUST00000097146 517 ntBASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2afb3S4R1G7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Celf4-206ENSMUST00000224553 1729 ntBASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Gm27646-201ENSMUST00000183989 110 ntBASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2afb3S4R1G7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms