Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Mir7023-201ENSMUST00000185093 64 ntBASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smarcb1Q9Z0H3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Gm5479-201ENSMUST00000160578 435 ntBASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smarcb1Q9Z0H3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Smarcb1Q9Z0H3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smarcb1Q9Z0H3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Gm13464-201ENSMUST00000119418 935 ntBASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smarcb1Q9Z0H3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Gm6415-201ENSMUST00000118488 348 ntBASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.44■□□□□ 0.06
Smarcb1Q9Z0H3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smarcb1Q9Z0H3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms