Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.45■□□□□ 0.22
Prpf40aQ9R1C7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40aQ9R1C7 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40aQ9R1C7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40aQ9R1C7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40aQ9R1C7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Prpf40aQ9R1C7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40aQ9R1C7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Prpf40aQ9R1C7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40aQ9R1C7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40aQ9R1C7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf40aQ9R1C7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Gm13323-201ENSMUST00000120245 1151 ntBASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Gm4899-201ENSMUST00000178708 719 ntBASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Gm44771-201ENSMUST00000206975 626 ntBASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf40aQ9R1C7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Gm1401-201ENSMUST00000122048 772 ntBASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Gm10499-201ENSMUST00000174094 934 ntBASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Efs-202ENSMUST00000227037 2540 ntBASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Prpf40aQ9R1C7 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prpf40aQ9R1C7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.41■□□□□ 0.22
Prpf40aQ9R1C7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms