Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn2Q9R0A1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Clcn2Q9R0A1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Clcn2Q9R0A1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn2Q9R0A1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn2Q9R0A1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn2Q9R0A1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Clcn2Q9R0A1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.29■□□□□ 0.04
Clcn2Q9R0A1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcn2Q9R0A1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Gm15358-201ENSMUST00000119249 520 ntBASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Grk6-207ENSMUST00000225925 2769 ntBASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Carlr-201ENSMUST00000181515 2574 ntBASIC15.28■□□□□ 0.04
Clcn2Q9R0A1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Gm8344-201ENSMUST00000119813 856 ntBASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Gm5682-201ENSMUST00000173402 505 ntBASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Gm18733-201ENSMUST00000173950 856 ntBASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Mir5126-201ENSMUST00000175513 77 ntBASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcn2Q9R0A1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Clcn2Q9R0A1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcn2Q9R0A1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcn2Q9R0A1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcn2Q9R0A1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Clcn2Q9R0A1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcn2Q9R0A1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.27■□□□□ 0.03
Clcn2Q9R0A1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcn2Q9R0A1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Clcn2Q9R0A1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcn2Q9R0A1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcn2Q9R0A1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Clcn2Q9R0A1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Gm23547-201ENSMUST00000158210 271 ntBASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Gm6550-201ENSMUST00000187574 993 ntBASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Clcn2Q9R0A1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms