Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm4Q9QXA5 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm4Q9QXA5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Mir6982-201ENSMUST00000184354 68 ntBASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Gm27742-201ENSMUST00000184667 60 ntBASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Gm43767-201ENSMUST00000198933 381 ntBASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Gm8655-201ENSMUST00000221159 852 ntBASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Lsm4Q9QXA5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Gm7506-201ENSMUST00000207758 815 ntBASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lsm4Q9QXA5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms