Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC20.45■□□□□ 0.86
Cpsf1Q9EPU4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf1Q9EPU4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf1Q9EPU4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC20.45■□□□□ 0.86
Cpsf1Q9EPU4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf1Q9EPU4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf1Q9EPU4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf1Q9EPU4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.45■□□□□ 0.86
Cpsf1Q9EPU4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf1Q9EPU4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf1Q9EPU4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf1Q9EPU4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf1Q9EPU4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpsf1Q9EPU4 Gm7775-201ENSMUST00000218871 853 ntBASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Gm9063-201ENSMUST00000223299 582 ntBASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Efs-202ENSMUST00000227037 2540 ntBASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Carlr-201ENSMUST00000181515 2574 ntBASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Gm16476-201ENSMUST00000221544 139 ntBASIC20.44■□□□□ 0.86
Cpsf1Q9EPU4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Gm6888-201ENSMUST00000221983 706 ntBASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cpsf1Q9EPU4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Gm24543-201ENSMUST00000103867 82 ntBASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Gm27631-201ENSMUST00000184163 466 ntBASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Gm45453-201ENSMUST00000211758 853 ntBASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Gm9867-201ENSMUST00000192212 2647 ntBASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpsf1Q9EPU4 Gm9252-201ENSMUST00000172364 1602 ntBASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 AC149588.3-201ENSMUST00000227515 150 ntBASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpsf1Q9EPU4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms