Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Upf1Q9EPU0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.77■□□□□ 0.27
Upf1Q9EPU0 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Upf1Q9EPU0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Upf1Q9EPU0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Upf1Q9EPU0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Upf1Q9EPU0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Upf1Q9EPU0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Upf1Q9EPU0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Gm4804-201ENSMUST00000182234 999 ntBASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Gm27320-201ENSMUST00000184892 109 ntBASIC16.76■□□□□ 0.27
Upf1Q9EPU0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Gm37008-201ENSMUST00000195712 319 ntBASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
Upf1Q9EPU0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Gm13612-201ENSMUST00000119276 390 ntBASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Gm22331-201ENSMUST00000158066 136 ntBASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Gm38671-201ENSMUST00000200573 130 ntBASIC16.75■□□□□ 0.27
Upf1Q9EPU0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 AC140406.1-201ENSMUST00000226481 465 ntBASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.75■□□□□ 0.27
Upf1Q9EPU0 BC001981-202ENSMUST00000191393 1545 ntBASIC16.75■□□□□ 0.27
Upf1Q9EPU0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Mir6979-201ENSMUST00000183927 56 ntBASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upf1Q9EPU0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Gm22334-201ENSMUST00000158070 133 ntBASIC16.73■□□□□ 0.27
Upf1Q9EPU0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Gm9826-201ENSMUST00000029124 1299 ntBASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Upf1Q9EPU0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms