Protein–RNA interactions for Protein: Q9EPE9

Atp13a1, Manganese-transporting ATPase 13A1, mousemouse

Known RBP Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a1Q9EPE9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Mir449b-201ENSMUST00000104833 80 ntBASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Gm27920-201ENSMUST00000183953 96 ntBASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Gm10253-201ENSMUST00000194270 940 ntBASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Gm7774-201ENSMUST00000200064 533 ntBASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Gm44872-201ENSMUST00000207864 420 ntBASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atp13a1Q9EPE9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Gm25948-201ENSMUST00000175334 112 ntBASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Gm38225-201ENSMUST00000194001 393 ntBASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Atp13a1Q9EPE9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Asic1-205ENSMUST00000228185 1818 ntBASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Mir6956-201ENSMUST00000183598 62 ntBASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atp13a1Q9EPE9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Atp13a1Q9EPE9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atp13a1Q9EPE9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atp13a1Q9EPE9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Atp13a1Q9EPE9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atp13a1Q9EPE9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Atp13a1Q9EPE9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atp13a1Q9EPE9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Atp13a1Q9EPE9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms