Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap53Q9D439 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap53Q9D439 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap53Q9D439 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap53Q9D439 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap53Q9D439 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap53Q9D439 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap53Q9D439 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Gm12350-201ENSMUST00000121208 462 ntBASIC16.4■□□□□ 0.22
Cfap53Q9D439 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.4■□□□□ 0.22
Cfap53Q9D439 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.4■□□□□ 0.22
Cfap53Q9D439 Gm18246-201ENSMUST00000221023 728 ntBASIC16.4■□□□□ 0.22
Cfap53Q9D439 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.4■□□□□ 0.22
Cfap53Q9D439 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.4■□□□□ 0.22
Cfap53Q9D439 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap53Q9D439 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.4■□□□□ 0.22
Cfap53Q9D439 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Gm27628-201ENSMUST00000184911 107 ntBASIC16.39■□□□□ 0.21
Cfap53Q9D439 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.39■□□□□ 0.21
Cfap53Q9D439 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.39■□□□□ 0.21
Cfap53Q9D439 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap53Q9D439 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.38■□□□□ 0.21
Cfap53Q9D439 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Gm43767-201ENSMUST00000198933 381 ntBASIC16.38■□□□□ 0.21
Cfap53Q9D439 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Cfap53Q9D439 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cfap53Q9D439 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cfap53Q9D439 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cfap53Q9D439 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cfap53Q9D439 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Cfap53Q9D439 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Cfap53Q9D439 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cfap53Q9D439 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cfap53Q9D439 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Cfap53Q9D439 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.37■□□□□ 0.21
Cfap53Q9D439 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.37■□□□□ 0.21
Cfap53Q9D439 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cfap53Q9D439 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cfap53Q9D439 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cfap53Q9D439 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms