Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc3Q9CW03 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.59■□□□□ 0.41
Smc3Q9CW03 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.59■□□□□ 0.41
Smc3Q9CW03 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc3Q9CW03 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Smc3Q9CW03 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
Smc3Q9CW03 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc3Q9CW03 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Smc3Q9CW03 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc3Q9CW03 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc3Q9CW03 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Smc3Q9CW03 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.58■□□□□ 0.41
Smc3Q9CW03 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smc3Q9CW03 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Gm44357-201ENSMUST00000195897 142 ntBASIC17.58■□□□□ 0.4
Smc3Q9CW03 Gm19658-201ENSMUST00000196231 138 ntBASIC17.58■□□□□ 0.4
Smc3Q9CW03 Gm44367-201ENSMUST00000196836 138 ntBASIC17.58■□□□□ 0.4
Smc3Q9CW03 Gm44350-201ENSMUST00000197197 138 ntBASIC17.58■□□□□ 0.4
Smc3Q9CW03 Gm44390-201ENSMUST00000197533 144 ntBASIC17.58■□□□□ 0.4
Smc3Q9CW03 Gm44313-201ENSMUST00000198018 138 ntBASIC17.58■□□□□ 0.4
Smc3Q9CW03 Gm44486-201ENSMUST00000198508 138 ntBASIC17.58■□□□□ 0.4
Smc3Q9CW03 Gm44314-201ENSMUST00000199263 138 ntBASIC17.58■□□□□ 0.4
Smc3Q9CW03 Gm44394-201ENSMUST00000199558 138 ntBASIC17.58■□□□□ 0.4
Smc3Q9CW03 Gm44484-201ENSMUST00000199873 138 ntBASIC17.58■□□□□ 0.4
Smc3Q9CW03 Gm44466-201ENSMUST00000200264 138 ntBASIC17.58■□□□□ 0.4
Smc3Q9CW03 Gm44359-201ENSMUST00000200671 138 ntBASIC17.58■□□□□ 0.4
Smc3Q9CW03 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.58■□□□□ 0.4
Smc3Q9CW03 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.58■□□□□ 0.4
Smc3Q9CW03 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.58■□□□□ 0.4
Smc3Q9CW03 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Smc3Q9CW03 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.58■□□□□ 0.4
Smc3Q9CW03 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Carlr-201ENSMUST00000181515 2574 ntBASIC17.58■□□□□ 0.4
Smc3Q9CW03 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smc3Q9CW03 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Ank2-226ENSMUST00000189368 339 ntBASIC17.57■□□□□ 0.4
Smc3Q9CW03 Gm43767-201ENSMUST00000198933 381 ntBASIC17.57■□□□□ 0.4
Smc3Q9CW03 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.57■□□□□ 0.4
Smc3Q9CW03 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smc3Q9CW03 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.56■□□□□ 0.4
Smc3Q9CW03 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smc3Q9CW03 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.56■□□□□ 0.4
Smc3Q9CW03 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms