Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm7Q9CQQ8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Gm24158-201ENSMUST00000175263 71 ntBASIC15.06■□□□□ 0
Lsm7Q9CQQ8 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.06■□□□□ 0
Lsm7Q9CQQ8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm7Q9CQQ8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.05■□□□□ 0
Lsm7Q9CQQ8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lsm7Q9CQQ8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
Lsm7Q9CQQ8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.05■□□□□ 0
Lsm7Q9CQQ8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lsm7Q9CQQ8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lsm7Q9CQQ8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Lsm7Q9CQQ8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.05■□□□□ -0
Lsm7Q9CQQ8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lsm7Q9CQQ8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lsm7Q9CQQ8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms