Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Gm19863-201ENSMUST00000192480 2218 ntBASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC9.76□□□□□ -0.85
Rpl39lQ9CQD0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Gm13337-201ENSMUST00000119183 1594 ntBASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Otx2os1-204ENSMUST00000227221 751 ntBASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rpl39lQ9CQD0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Gm12008-201ENSMUST00000117791 755 ntBASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 AC127302.2-201ENSMUST00000215212 268 ntBASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Gm20049-201ENSMUST00000219950 730 ntBASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rpl39lQ9CQD0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms