Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Gm15173-201ENSMUST00000122049 433 ntBASIC14.64□□□□□ -0.07
Trim16Q99PP9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Gm18195-201ENSMUST00000207604 706 ntBASIC14.64□□□□□ -0.07
Trim16Q99PP9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim16Q99PP9 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.64□□□□□ -0.07
Trim16Q99PP9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trim16Q99PP9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.63□□□□□ -0.07
Trim16Q99PP9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.63□□□□□ -0.07
Trim16Q99PP9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim16Q99PP9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.62□□□□□ -0.07
Trim16Q99PP9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Gm6550-201ENSMUST00000187574 993 ntBASIC14.62□□□□□ -0.07
Trim16Q99PP9 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.62□□□□□ -0.07
Trim16Q99PP9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim16Q99PP9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.61□□□□□ -0.07
Trim16Q99PP9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim16Q99PP9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim16Q99PP9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms