Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim33Q99PP7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim33Q99PP7 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trim33Q99PP7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim33Q99PP7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.83□□□□□ -0.03
Trim33Q99PP7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim33Q99PP7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trim33Q99PP7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim33Q99PP7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.83□□□□□ -0.04
Trim33Q99PP7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.83□□□□□ -0.04
Trim33Q99PP7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Gm15823-201ENSMUST00000064305 670 ntBASIC14.83□□□□□ -0.04
Trim33Q99PP7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.83□□□□□ -0.04
Trim33Q99PP7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim33Q99PP7 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.82□□□□□ -0.04
Trim33Q99PP7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim33Q99PP7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.82□□□□□ -0.04
Trim33Q99PP7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.82□□□□□ -0.04
Trim33Q99PP7 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.82□□□□□ -0.04
Trim33Q99PP7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Psmb5-202ENSMUST00000227257 622 ntBASIC14.82□□□□□ -0.04
Trim33Q99PP7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim33Q99PP7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim33Q99PP7 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim33Q99PP7 Gm14140-201ENSMUST00000119999 995 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms