Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh23Q99PF4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cdh23Q99PF4 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh23Q99PF4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Cdh23Q99PF4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh23Q99PF4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh23Q99PF4 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.02□□□□□ -0.01
Cdh23Q99PF4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh23Q99PF4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh23Q99PF4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Gm15808-201ENSMUST00000119046 604 ntBASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh23Q99PF4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh23Q99PF4 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cdh23Q99PF4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh23Q99PF4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh23Q99PF4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cdh23Q99PF4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Cdh23Q99PF4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh23Q99PF4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh23Q99PF4 Gm22018-201ENSMUST00000104357 131 ntBASIC15□□□□□ -0.01
Cdh23Q99PF4 Mir1894-201ENSMUST00000122802 81 ntBASIC15□□□□□ -0.01
Cdh23Q99PF4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdh23Q99PF4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh23Q99PF4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh23Q99PF4 Gm42690-201ENSMUST00000197921 1836 ntBASIC15□□□□□ -0.01
Cdh23Q99PF4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh23Q99PF4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15□□□□□ -0.01
Cdh23Q99PF4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cdh23Q99PF4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh23Q99PF4 CU024892.2-201ENSMUST00000224608 832 ntBASIC15□□□□□ -0.01
Cdh23Q99PF4 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh23Q99PF4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Cdh23Q99PF4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15□□□□□ -0.01
Cdh23Q99PF4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdh23Q99PF4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdh23Q99PF4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh23Q99PF4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Gm18307-201ENSMUST00000206864 949 ntBASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Gm8463-201ENSMUST00000208573 613 ntBASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdh23Q99PF4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms