Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RtcbQ99LF4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC18.36■□□□□ 0.53
RtcbQ99LF4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RtcbQ99LF4 Gm11918-201ENSMUST00000121660 179 ntBASIC18.36■□□□□ 0.53
RtcbQ99LF4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RtcbQ99LF4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RtcbQ99LF4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RtcbQ99LF4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RtcbQ99LF4 Gm21854-201ENSMUST00000179901 471 ntBASIC18.36■□□□□ 0.53
RtcbQ99LF4 Gm28760-201ENSMUST00000185995 736 ntBASIC18.36■□□□□ 0.53
RtcbQ99LF4 Gm10766-202ENSMUST00000194123 606 ntBASIC18.36■□□□□ 0.53
RtcbQ99LF4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RtcbQ99LF4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
RtcbQ99LF4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RtcbQ99LF4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RtcbQ99LF4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RtcbQ99LF4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
RtcbQ99LF4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RtcbQ99LF4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.36■□□□□ 0.53
RtcbQ99LF4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RtcbQ99LF4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RtcbQ99LF4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RtcbQ99LF4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC18.35■□□□□ 0.53
RtcbQ99LF4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RtcbQ99LF4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RtcbQ99LF4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RtcbQ99LF4 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC18.35■□□□□ 0.53
RtcbQ99LF4 Gm15824-201ENSMUST00000119516 955 ntBASIC18.35■□□□□ 0.53
RtcbQ99LF4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC18.35■□□□□ 0.53
RtcbQ99LF4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RtcbQ99LF4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RtcbQ99LF4 Gm18624-201ENSMUST00000220966 658 ntBASIC18.35■□□□□ 0.53
RtcbQ99LF4 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RtcbQ99LF4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RtcbQ99LF4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RtcbQ99LF4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RtcbQ99LF4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RtcbQ99LF4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RtcbQ99LF4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RtcbQ99LF4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RtcbQ99LF4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RtcbQ99LF4 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Gm13464-201ENSMUST00000119418 935 ntBASIC18.34■□□□□ 0.53
RtcbQ99LF4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Gm31326-201ENSMUST00000191856 1048 ntBASIC18.34■□□□□ 0.53
RtcbQ99LF4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RtcbQ99LF4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RtcbQ99LF4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RtcbQ99LF4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
RtcbQ99LF4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC18.33■□□□□ 0.52
RtcbQ99LF4 AC153962.4-201ENSMUST00000217878 242 ntBASIC18.33■□□□□ 0.52
RtcbQ99LF4 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.33■□□□□ 0.52
RtcbQ99LF4 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RtcbQ99LF4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RtcbQ99LF4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RtcbQ99LF4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RtcbQ99LF4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RtcbQ99LF4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.33■□□□□ 0.52
RtcbQ99LF4 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
RtcbQ99LF4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Gm6266-201ENSMUST00000203844 806 ntBASIC18.32■□□□□ 0.52
RtcbQ99LF4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC18.32■□□□□ 0.52
RtcbQ99LF4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.32■□□□□ 0.52
RtcbQ99LF4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RtcbQ99LF4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RtcbQ99LF4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RtcbQ99LF4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RtcbQ99LF4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RtcbQ99LF4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms