Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab28Q99KL7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rab28Q99KL7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rab28Q99KL7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rab28Q99KL7 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.42□□□□□ -0.1
Rab28Q99KL7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.42□□□□□ -0.1
Rab28Q99KL7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.42□□□□□ -0.1
Rab28Q99KL7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Rab28Q99KL7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.42□□□□□ -0.1
Rab28Q99KL7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.42□□□□□ -0.1
Rab28Q99KL7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rab28Q99KL7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Gm27702-201ENSMUST00000184512 56 ntBASIC14.41□□□□□ -0.1
Rab28Q99KL7 Gm27494-201ENSMUST00000184735 189 ntBASIC14.41□□□□□ -0.1
Rab28Q99KL7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Gm20553-201ENSMUST00000204205 844 ntBASIC14.41□□□□□ -0.1
Rab28Q99KL7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rab28Q99KL7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.41□□□□□ -0.1
Rab28Q99KL7 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.41□□□□□ -0.1
Rab28Q99KL7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.41□□□□□ -0.1
Rab28Q99KL7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.41□□□□□ -0.1
Rab28Q99KL7 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.41□□□□□ -0.1
Rab28Q99KL7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rab28Q99KL7 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.4□□□□□ -0.1
Rab28Q99KL7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.4□□□□□ -0.1
Rab28Q99KL7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Mir1895-201ENSMUST00000122615 79 ntBASIC14.4□□□□□ -0.1
Rab28Q99KL7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Gm6736-201ENSMUST00000166583 948 ntBASIC14.4□□□□□ -0.1
Rab28Q99KL7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.4□□□□□ -0.1
Rab28Q99KL7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.4□□□□□ -0.1
Rab28Q99KL7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rab28Q99KL7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms