Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.5■□□□□ 0.39
Hps4Q99KG7 Gm13453-201ENSMUST00000118708 357 ntBASIC17.5■□□□□ 0.39
Hps4Q99KG7 Gm12428-201ENSMUST00000119844 727 ntBASIC17.5■□□□□ 0.39
Hps4Q99KG7 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Gm5479-201ENSMUST00000160578 435 ntBASIC17.5■□□□□ 0.39
Hps4Q99KG7 Gm27989-201ENSMUST00000184721 107 ntBASIC17.5■□□□□ 0.39
Hps4Q99KG7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hps4Q99KG7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.49■□□□□ 0.39
Hps4Q99KG7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.49■□□□□ 0.39
Hps4Q99KG7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.49■□□□□ 0.39
Hps4Q99KG7 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.49■□□□□ 0.39
Hps4Q99KG7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hps4Q99KG7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.48■□□□□ 0.39
Hps4Q99KG7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.48■□□□□ 0.39
Hps4Q99KG7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Gm25144-201ENSMUST00000179561 110 ntBASIC17.48■□□□□ 0.39
Hps4Q99KG7 Gm25352-201ENSMUST00000179815 110 ntBASIC17.48■□□□□ 0.39
Hps4Q99KG7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Mir6977-201ENSMUST00000184960 64 ntBASIC17.48■□□□□ 0.39
Hps4Q99KG7 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.48■□□□□ 0.39
Hps4Q99KG7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hps4Q99KG7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps4Q99KG7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps4Q99KG7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps4Q99KG7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps4Q99KG7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps4Q99KG7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps4Q99KG7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Hps4Q99KG7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hps4Q99KG7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Hps4Q99KG7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps4Q99KG7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.47■□□□□ 0.39
Hps4Q99KG7 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.47■□□□□ 0.39
Hps4Q99KG7 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps4Q99KG7 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.47■□□□□ 0.39
Hps4Q99KG7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Hps4Q99KG7 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps4Q99KG7 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.47■□□□□ 0.39
Hps4Q99KG7 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.47■□□□□ 0.39
Hps4Q99KG7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hps4Q99KG7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms