Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims1Q99JW4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Lims1Q99JW4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Lims1Q99JW4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lims1Q99JW4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims1Q99JW4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims1Q99JW4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims1Q99JW4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims1Q99JW4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims1Q99JW4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims1Q99JW4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Lims1Q99JW4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims1Q99JW4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims1Q99JW4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lims1Q99JW4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lims1Q99JW4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims1Q99JW4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.62□□□□□ -0.23
Lims1Q99JW4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm44357-201ENSMUST00000195897 142 ntBASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm19658-201ENSMUST00000196231 138 ntBASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm44367-201ENSMUST00000196836 138 ntBASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm44350-201ENSMUST00000197197 138 ntBASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm44390-201ENSMUST00000197533 144 ntBASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm44313-201ENSMUST00000198018 138 ntBASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm44486-201ENSMUST00000198508 138 ntBASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm44314-201ENSMUST00000199263 138 ntBASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm44394-201ENSMUST00000199558 138 ntBASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm44484-201ENSMUST00000199873 138 ntBASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm44466-201ENSMUST00000200264 138 ntBASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm44359-201ENSMUST00000200671 138 ntBASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm44771-201ENSMUST00000206975 626 ntBASIC13.62□□□□□ -0.23
Lims1Q99JW4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.62□□□□□ -0.23
Lims1Q99JW4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lims1Q99JW4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lims1Q99JW4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lims1Q99JW4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms