Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcd2Q99JR8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Gm45098-201ENSMUST00000207179 657 ntBASIC15.04■□□□□ -0
Smarcd2Q99JR8 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcd2Q99JR8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.03■□□□□ -0
Smarcd2Q99JR8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Dancr-204ENSMUST00000132389 2347 ntBASIC15.03■□□□□ -0
Smarcd2Q99JR8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.03■□□□□ -0
Smarcd2Q99JR8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.03■□□□□ -0
Smarcd2Q99JR8 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcd2Q99JR8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcd2Q99JR8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcd2Q99JR8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Smarcd2Q99JR8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Smarcd2Q99JR8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.02■□□□□ -0
Smarcd2Q99JR8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Smarcd2Q99JR8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcd2Q99JR8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcd2Q99JR8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Smarcd2Q99JR8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Smarcd2Q99JR8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcd2Q99JR8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.02■□□□□ -0
Smarcd2Q99JR8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcd2Q99JR8 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcd2Q99JR8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcd2Q99JR8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcd2Q99JR8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Smarcd2Q99JR8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcd2Q99JR8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcd2Q99JR8 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.02□□□□□ -0.01
Smarcd2Q99JR8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcd2Q99JR8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Smarcd2Q99JR8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcd2Q99JR8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.02□□□□□ -0.01
Smarcd2Q99JR8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Gm13464-201ENSMUST00000119418 935 ntBASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Gm15321-201ENSMUST00000121290 288 ntBASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Gm24694-201ENSMUST00000180054 110 ntBASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Gm27663-201ENSMUST00000184839 110 ntBASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcd2Q99JR8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms