Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb22Q91XZ8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb22Q91XZ8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.43■□□□□ 0.38
Pcdhb22Q91XZ8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb22Q91XZ8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdhb22Q91XZ8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb22Q91XZ8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb22Q91XZ8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb22Q91XZ8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb22Q91XZ8 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.43■□□□□ 0.38
Pcdhb22Q91XZ8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb22Q91XZ8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb22Q91XZ8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Gm25925-201ENSMUST00000158314 306 ntBASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb22Q91XZ8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Gm4995-201ENSMUST00000117247 432 ntBASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Gm20553-201ENSMUST00000204205 844 ntBASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Gm15823-201ENSMUST00000064305 670 ntBASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb22Q91XZ8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb22Q91XZ8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb22Q91XZ8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.39■□□□□ 0.38
Pcdhb22Q91XZ8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
Pcdhb22Q91XZ8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Gm8749-201ENSMUST00000117737 331 ntBASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Gm13464-201ENSMUST00000119418 935 ntBASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Gm45612-201ENSMUST00000211320 160 ntBASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb22Q91XZ8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms