Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb3Q91XZ7 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
Pcdhb3Q91XZ7 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Gm24589-201ENSMUST00000116692 94 ntBASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Gm19324-201ENSMUST00000213229 1169 ntBASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb3Q91XZ7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms