Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb6Q91XZ4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb6Q91XZ4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.33■□□□□ 0.05
Pcdhb6Q91XZ4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb6Q91XZ4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb6Q91XZ4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb6Q91XZ4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Pcdhb6Q91XZ4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb6Q91XZ4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb6Q91XZ4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.33■□□□□ 0.05
Pcdhb6Q91XZ4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Pcdhb6Q91XZ4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Pcdhb6Q91XZ4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Pcdhb6Q91XZ4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb6Q91XZ4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Gm16198-201ENSMUST00000118766 670 ntBASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Gm5177-201ENSMUST00000183092 997 ntBASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Carlr-201ENSMUST00000181515 2574 ntBASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb6Q91XZ4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb6Q91XZ4 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms