Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Gm45167-201ENSMUST00000208007 322 ntBASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 AV026068-213ENSMUST00000223675 1171 ntBASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb8Q91XZ2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb8Q91XZ2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Gm43767-201ENSMUST00000198933 381 ntBASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb8Q91XZ2 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb8Q91XZ2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms