Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga4Q91XY4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga4Q91XY4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Gm11779-201ENSMUST00000118541 368 ntBASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Gm5264-201ENSMUST00000190584 848 ntBASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga4Q91XY4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga4Q91XY4 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.72□□□□□ -0.05
Pcdhga4Q91XY4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga4Q91XY4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga4Q91XY4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga4Q91XY4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms