Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Usb1Q91W78 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.79□□□□□ -0.04
Usb1Q91W78 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.79□□□□□ -0.04
Usb1Q91W78 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.79□□□□□ -0.04
Usb1Q91W78 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usb1Q91W78 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usb1Q91W78 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usb1Q91W78 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usb1Q91W78 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usb1Q91W78 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usb1Q91W78 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usb1Q91W78 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usb1Q91W78 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Usb1Q91W78 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.78□□□□□ -0.04
Usb1Q91W78 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Usb1Q91W78 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Usb1Q91W78 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.78□□□□□ -0.04
Usb1Q91W78 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.78□□□□□ -0.04
Usb1Q91W78 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Usb1Q91W78 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Gm45167-201ENSMUST00000208007 322 ntBASIC14.78□□□□□ -0.04
Usb1Q91W78 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Usb1Q91W78 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Gm5867-201ENSMUST00000063197 592 ntBASIC14.78□□□□□ -0.04
Usb1Q91W78 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
Usb1Q91W78 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Usb1Q91W78 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Usb1Q91W78 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usb1Q91W78 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usb1Q91W78 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usb1Q91W78 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usb1Q91W78 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.77□□□□□ -0.04
Usb1Q91W78 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Usb1Q91W78 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usb1Q91W78 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usb1Q91W78 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usb1Q91W78 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Usb1Q91W78 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.77□□□□□ -0.05
Usb1Q91W78 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.77□□□□□ -0.05
Usb1Q91W78 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
Usb1Q91W78 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usb1Q91W78 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.77□□□□□ -0.05
Usb1Q91W78 Mir8117-201ENSMUST00000184773 107 ntBASIC14.77□□□□□ -0.05
Usb1Q91W78 Gm9682-201ENSMUST00000197505 556 ntBASIC14.77□□□□□ -0.05
Usb1Q91W78 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.77□□□□□ -0.05
Usb1Q91W78 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.77□□□□□ -0.05
Usb1Q91W78 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.77□□□□□ -0.05
Usb1Q91W78 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.77□□□□□ -0.05
Usb1Q91W78 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usb1Q91W78 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Usb1Q91W78 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usb1Q91W78 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.77□□□□□ -0.05
Usb1Q91W78 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usb1Q91W78 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usb1Q91W78 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usb1Q91W78 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usb1Q91W78 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.77□□□□□ -0.05
Usb1Q91W78 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Usb1Q91W78 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usb1Q91W78 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usb1Q91W78 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usb1Q91W78 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usb1Q91W78 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usb1Q91W78 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.76□□□□□ -0.05
Usb1Q91W78 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usb1Q91W78 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usb1Q91W78 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.76□□□□□ -0.05
Usb1Q91W78 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usb1Q91W78 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usb1Q91W78 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usb1Q91W78 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Usb1Q91W78 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Usb1Q91W78 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.76□□□□□ -0.05
Usb1Q91W78 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Usb1Q91W78 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms