Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb11Q91UZ8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Gm15467-201ENSMUST00000120582 445 ntBASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Gm45747-201ENSMUST00000212203 999 ntBASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Thap2-203ENSMUST00000218989 527 ntBASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.29■□□□□ 0.04
Pcdhb11Q91UZ8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Gm16198-201ENSMUST00000118766 670 ntBASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Gm14494-201ENSMUST00000118786 435 ntBASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Mir8117-201ENSMUST00000184773 107 ntBASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb11Q91UZ8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb11Q91UZ8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms