Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Mir8098-201ENSMUST00000184011 137 ntBASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Gm6550-201ENSMUST00000187574 993 ntBASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H1fooQ8VIK3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
H1fooQ8VIK3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
H1fooQ8VIK3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
H1fooQ8VIK3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H1fooQ8VIK3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H1fooQ8VIK3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
H1fooQ8VIK3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
H1fooQ8VIK3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Gm7862-201ENSMUST00000121461 292 ntBASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
H1fooQ8VIK3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms