Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Rpph1-201ENSMUST00000175096 319 ntBASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Gm43125-201ENSMUST00000201724 730 ntBASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dnajc28Q8VCE1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Gm25948-201ENSMUST00000175334 112 ntBASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Dnajc28Q8VCE1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dnajc28Q8VCE1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Dnajc28Q8VCE1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Dnajc28Q8VCE1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Dnajc28Q8VCE1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.3■□□□□ 0.2
Dnajc28Q8VCE1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Dnajc28Q8VCE1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms