Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ndc1Q8VCB1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Gm45612-201ENSMUST00000211320 160 ntBASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ndc1Q8VCB1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Gm9385-201ENSMUST00000117563 472 ntBASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Gm16198-201ENSMUST00000118766 670 ntBASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ndc1Q8VCB1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Gm13365-201ENSMUST00000121188 973 ntBASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Gm11745-201ENSMUST00000121669 448 ntBASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ndc1Q8VCB1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms