Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Nup85Q8R480 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Nup85Q8R480 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Nup85Q8R480 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Nup85Q8R480 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Nup85Q8R480 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.36■□□□□ 0.05
Nup85Q8R480 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Nup85Q8R480 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.36■□□□□ 0.05
Nup85Q8R480 Gm24513-201ENSMUST00000174964 138 ntBASIC15.36■□□□□ 0.05
Nup85Q8R480 Mir3113-201ENSMUST00000175478 76 ntBASIC15.36■□□□□ 0.05
Nup85Q8R480 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.36■□□□□ 0.05
Nup85Q8R480 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.36■□□□□ 0.05
Nup85Q8R480 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Nup85Q8R480 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.36■□□□□ 0.05
Nup85Q8R480 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Nup85Q8R480 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Nup85Q8R480 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Nup85Q8R480 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Nup85Q8R480 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.36■□□□□ 0.05
Nup85Q8R480 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nup85Q8R480 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.36■□□□□ 0.05
Nup85Q8R480 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Nup85Q8R480 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.35■□□□□ 0.05
Nup85Q8R480 Gm4995-201ENSMUST00000117247 432 ntBASIC15.35■□□□□ 0.05
Nup85Q8R480 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.35■□□□□ 0.05
Nup85Q8R480 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.35■□□□□ 0.05
Nup85Q8R480 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Nup85Q8R480 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Gm27300-201ENSMUST00000184085 97 ntBASIC15.35■□□□□ 0.05
Nup85Q8R480 Gm27335-201ENSMUST00000184758 97 ntBASIC15.35■□□□□ 0.05
Nup85Q8R480 Gm27397-201ENSMUST00000184997 107 ntBASIC15.35■□□□□ 0.05
Nup85Q8R480 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Gm10175-201ENSMUST00000086013 645 ntBASIC15.35■□□□□ 0.05
Nup85Q8R480 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Nup85Q8R480 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nup85Q8R480 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.34■□□□□ 0.05
Nup85Q8R480 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup85Q8R480 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup85Q8R480 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Nup85Q8R480 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup85Q8R480 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup85Q8R480 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup85Q8R480 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup85Q8R480 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Nup85Q8R480 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup85Q8R480 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup85Q8R480 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup85Q8R480 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup85Q8R480 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup85Q8R480 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup85Q8R480 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.34■□□□□ 0.05
Nup85Q8R480 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nup85Q8R480 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nup85Q8R480 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms