Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Gm44335-201ENSMUST00000196879 141 ntBASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Gm44297-201ENSMUST00000198304 141 ntBASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Gm44346-201ENSMUST00000198851 141 ntBASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cuedc1Q8R3V6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cuedc1Q8R3V6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Gm13365-201ENSMUST00000121188 973 ntBASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cuedc1Q8R3V6 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms