Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Slf1Q8R3P9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Carlr-201ENSMUST00000181515 2574 ntBASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.13■□□□□ 0.01
Slf1Q8R3P9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Gm12008-201ENSMUST00000117791 755 ntBASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.12■□□□□ 0.01
Slf1Q8R3P9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.11■□□□□ 0.01
Slf1Q8R3P9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Slf1Q8R3P9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms