Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Carlr-201ENSMUST00000181515 2574 ntBASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Gm14140-201ENSMUST00000119999 995 ntBASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.62■□□□□ 0.41
Atf7Q8R0S1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Gm2272-201ENSMUST00000194903 582 ntBASIC17.61■□□□□ 0.41
Atf7Q8R0S1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Psmb5-202ENSMUST00000227257 622 ntBASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atf7Q8R0S1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.6■□□□□ 0.41
Atf7Q8R0S1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf7Q8R0S1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf7Q8R0S1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf7Q8R0S1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atf7Q8R0S1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf7Q8R0S1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Atf7Q8R0S1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf7Q8R0S1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf7Q8R0S1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atf7Q8R0S1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.59■□□□□ 0.41
Atf7Q8R0S1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
Atf7Q8R0S1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.59■□□□□ 0.41
Atf7Q8R0S1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atf7Q8R0S1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms