Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc12Q8K5B8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc12Q8K5B8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Hoxc12Q8K5B8 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.52□□□□□ -0.4
Hoxc12Q8K5B8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc12Q8K5B8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc12Q8K5B8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc12Q8K5B8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc12Q8K5B8 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Hoxc12Q8K5B8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hoxc12Q8K5B8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc12Q8K5B8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hoxc12Q8K5B8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc12Q8K5B8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc12Q8K5B8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.52□□□□□ -0.41
Hoxc12Q8K5B8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Gm10499-201ENSMUST00000174094 934 ntBASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc12Q8K5B8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc12Q8K5B8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc12Q8K5B8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc12Q8K5B8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc12Q8K5B8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Hoxc12Q8K5B8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc12Q8K5B8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc12Q8K5B8 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.5□□□□□ -0.41
Hoxc12Q8K5B8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc12Q8K5B8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc12Q8K5B8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc12Q8K5B8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc12Q8K5B8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc12Q8K5B8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc12Q8K5B8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms