Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Cystm1Q8K353 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Cystm1Q8K353 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC9.42□□□□□ -0.9
Cystm1Q8K353 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Gm43061-201ENSMUST00000198850 2241 ntBASIC9.42□□□□□ -0.9
Cystm1Q8K353 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Gm23547-201ENSMUST00000158210 271 ntBASIC9.42□□□□□ -0.9
Cystm1Q8K353 Gm6623-201ENSMUST00000173570 544 ntBASIC9.42□□□□□ -0.9
Cystm1Q8K353 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Gm17807-201ENSMUST00000186869 298 ntBASIC9.42□□□□□ -0.9
Cystm1Q8K353 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC9.42□□□□□ -0.9
Cystm1Q8K353 Gm18115-201ENSMUST00000221209 621 ntBASIC9.42□□□□□ -0.9
Cystm1Q8K353 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cystm1Q8K353 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Grk6-205ENSMUST00000224653 2976 ntBASIC9.41□□□□□ -0.9
Cystm1Q8K353 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Gm27741-201ENSMUST00000185060 237 ntBASIC9.41□□□□□ -0.9
Cystm1Q8K353 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cystm1Q8K353 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cystm1Q8K353 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms