Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.34□□□□□ -0.27
ShfQ8CG80 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ShfQ8CG80 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ShfQ8CG80 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
ShfQ8CG80 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.34□□□□□ -0.27
ShfQ8CG80 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.34□□□□□ -0.27
ShfQ8CG80 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ShfQ8CG80 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
ShfQ8CG80 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
ShfQ8CG80 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ShfQ8CG80 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ShfQ8CG80 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ShfQ8CG80 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ShfQ8CG80 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.33□□□□□ -0.28
ShfQ8CG80 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.33□□□□□ -0.28
ShfQ8CG80 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Gm13418-201ENSMUST00000119097 944 ntBASIC13.33□□□□□ -0.28
ShfQ8CG80 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.33□□□□□ -0.28
ShfQ8CG80 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.33□□□□□ -0.28
ShfQ8CG80 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ShfQ8CG80 Gm6089-201ENSMUST00000197666 938 ntBASIC13.33□□□□□ -0.28
ShfQ8CG80 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.33□□□□□ -0.28
ShfQ8CG80 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ShfQ8CG80 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.33□□□□□ -0.28
ShfQ8CG80 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ShfQ8CG80 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ShfQ8CG80 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShfQ8CG80 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ShfQ8CG80 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ShfQ8CG80 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShfQ8CG80 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.32□□□□□ -0.28
ShfQ8CG80 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShfQ8CG80 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShfQ8CG80 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ShfQ8CG80 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ShfQ8CG80 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.32□□□□□ -0.28
ShfQ8CG80 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShfQ8CG80 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
ShfQ8CG80 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ShfQ8CG80 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShfQ8CG80 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ShfQ8CG80 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShfQ8CG80 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShfQ8CG80 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ShfQ8CG80 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShfQ8CG80 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShfQ8CG80 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShfQ8CG80 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ShfQ8CG80 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
ShfQ8CG80 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ShfQ8CG80 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShfQ8CG80 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ShfQ8CG80 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.31□□□□□ -0.28
ShfQ8CG80 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.31□□□□□ -0.28
ShfQ8CG80 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.31□□□□□ -0.28
ShfQ8CG80 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
ShfQ8CG80 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.31□□□□□ -0.28
ShfQ8CG80 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.31□□□□□ -0.28
ShfQ8CG80 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ShfQ8CG80 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms