Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Gm25911-201ENSMUST00000157621 56 ntBASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Gm21009-201ENSMUST00000197169 1669 ntBASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC19.05■□□□□ 0.64
Ccdc60Q8C4J0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc60Q8C4J0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc60Q8C4J0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc60Q8C4J0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Ccdc60Q8C4J0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc60Q8C4J0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc60Q8C4J0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc60Q8C4J0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc60Q8C4J0 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms