Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Tsen54Q8C2A2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tsen54Q8C2A2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Tsen54Q8C2A2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tsen54Q8C2A2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tsen54Q8C2A2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tsen54Q8C2A2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tsen54Q8C2A2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tsen54Q8C2A2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tsen54Q8C2A2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tsen54Q8C2A2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tsen54Q8C2A2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tsen54Q8C2A2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tsen54Q8C2A2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 Gm23547-201ENSMUST00000158210 271 ntBASIC12.52□□□□□ -0.41
Tsen54Q8C2A2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms