Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sh3rf2Q8BZT2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Gm7063-201ENSMUST00000186840 981 ntBASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sh3rf2Q8BZT2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Gm6415-201ENSMUST00000118488 348 ntBASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Gm27622-201ENSMUST00000183779 60 ntBASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh3rf2Q8BZT2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Gm15693-201ENSMUST00000120470 637 ntBASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.1■□□□□ 0.01
Sh3rf2Q8BZT2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms