Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp43Q8BUM9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp43Q8BUM9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.12■□□□□ 0.01
Usp43Q8BUM9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Gm5364-201ENSMUST00000216789 889 ntBASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.12■□□□□ 0.01
Usp43Q8BUM9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Gm5177-201ENSMUST00000183092 997 ntBASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp43Q8BUM9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Carlr-201ENSMUST00000181515 2574 ntBASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Usp43Q8BUM9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp43Q8BUM9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms